BioSample Run ReleaseDate LoadDate spots bases spots_with_mates avgLength size_MB AssemblyName download_path Experiment LibraryName LibraryStrategy LibrarySelection LibrarySource LibraryLayout InsertSize InsertDev Platform Model SRAStudy BioProject Study_Pubmed_id ProjectID Sample SampleType TaxID ScientificName SampleName g1k_pop_code source g1k_analysis_group Subject_ID Sex Disease Tumor Affection_Status Analyte_Type Histological_Type Body_Site CenterName Submission dbgap_study_accession Consent RunHash ReadHash uid title organization taxonomy sra geo cell line cell type growth protocol source_name treatment group SAMN05441358 SRR3954084 2017-02-13T15:46:23Z 2016-07-26T14:53:27Z 33726493 1720051143 0 51 672 GCA_000001405.13 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos2/sra-pub-run-3/SRR3954084/SRR3954084.1 SRX1978325 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2000 SRP079914 PRJNA335388 2 335388 SRS1585891 simple 9606 Homo sapiens GSM2252624 no GEO SRA444664 public 4E9A910718C8024B27CB560AF079B759 2857E2D3ADE23254AD29DF27DA57D9CB 5441358 MDA-MB231_Control Epidemiology and Biostatistics, UT Health Science Center at San Antonio 9606 SRS1585891 GSM2252624 MDA-MB231 Breast cancer (Basal type) Breast cancer MDA-MB231 DMSO MDA.dmso SAMN05441357 SRR3954085 2017-02-13T15:46:23Z 2016-07-26T14:54:07Z 32723303 1668888453 0 51 656 GCA_000001405.13 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos2/sra-pub-run-3/SRR3954085/SRR3954085.1 SRX1978326 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2000 SRP079914 PRJNA335388 2 335388 SRS1585892 simple 9606 Homo sapiens GSM2252625 no GEO SRA444664 public 70FC901CE87EFE0D903DE815B906C275 6C60F26C4C9168CC2EB0CEE5D74FE7D3 5441357 MDA-MB231_Doxorubicin Epidemiology and Biostatistics, UT Health Science Center at San Antonio 9606 SRS1585892 GSM2252625 MDA-MB231 Breast cancer (Basal type) Breast cancer MDA-MB231 1μM Doxorubicin for 8 hours MDA.doxorubicin_1uM SAMN05441356 SRR3954086 2017-02-13T15:46:23Z 2016-07-26T14:55:53Z 38433887 1960128237 0 51 763 GCA_000001405.13 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos1/sra-pub-run-10/SRR3954086/SRR3954086.1 SRX1978327 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2000 SRP079914 PRJNA335388 2 335388 SRS1585893 simple 9606 Homo sapiens GSM2252626 no GEO SRA444664 public AAC768D229DDC9DB67998854CC6DE2D5 F6BEBF62155A42FF3370C2FC87800963 5441356 MDA-MB231_Etoposide Epidemiology and Biostatistics, UT Health Science Center at San Antonio 9606 SRS1585893 GSM2252626 MDA-MB231 Breast cancer (Basal type) Breast cancer MDA-MB231 20μM Etoposide for 8 hours MDA.etoposide_20uM SAMN05441355 SRR3954087 2017-02-13T15:46:23Z 2016-07-26T14:55:33Z 36945938 1884242838 0 51 738 GCA_000001405.13 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos1/sra-pub-run-10/SRR3954087/SRR3954087.1 SRX1978328 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2000 SRP079914 PRJNA335388 2 335388 SRS1585894 simple 9606 Homo sapiens GSM2252627 no GEO SRA444664 public 70B355AE5D46B1841FADD22C29476E03 84055B358FA3E74C42C6FC1245D994C1 5441355 MDA-MB231_Paclitaxel Epidemiology and Biostatistics, UT Health Science Center at San Antonio 9606 SRS1585894 GSM2252627 MDA-MB231 Breast cancer (Basal type) Breast cancer MDA-MB231 0.2μM Paclitaxel for 8 hours MDA.paclitaxel_0.2uM SAMN05441354 SRR3954088 2017-02-13T15:46:23Z 2016-07-26T14:53:31Z 25002076 1275105876 0 51 505 GCA_000001405.13 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos2/sra-pub-run-3/SRR3954088/SRR3954088.1 SRX1978329 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2000 SRP079914 PRJNA335388 2 335388 SRS1585896 simple 9606 Homo sapiens GSM2252628 no GEO SRA444664 public 7699CB74A606D5FF17AE256779D5B7FB E125571456627EE1544F9E5E7E0CB02F 5441354 U2OS_Control Epidemiology and Biostatistics, UT Health Science Center at San Antonio 9606 SRS1585896 GSM2252628 U2OS Osteosarcoma Osteosarcoma U2OS DMSO U2OS.dmso SAMN05441362 SRR3954089 2017-02-13T15:46:23Z 2016-07-26T14:56:22Z 35977355 1834845105 0 51 728 GCA_000001405.13 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos2/sra-pub-run-3/SRR3954089/SRR3954089.1 SRX1978330 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2000 SRP079914 PRJNA335388 2 335388 SRS1585897 simple 9606 Homo sapiens GSM2252629 no GEO SRA444664 public 7FF310233F65A575D62D46A44B1E93CE 0458C3347FBCD6B67077D59549218737 5441362 U2OS_Doxorubicin Epidemiology and Biostatistics, UT Health Science Center at San Antonio 9606 SRS1585897 GSM2252629 U2OS Osteosarcoma Osteosarcoma U2OS 1μM Doxorubicin for 8 hours U2OS.doxorubicin_1uM SAMN05441361 SRR3954090 2017-02-13T15:46:23Z 2016-07-26T14:54:56Z 42690898 2177235798 0 51 865 GCA_000001405.13 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos1/sra-pub-run-10/SRR3954090/SRR3954090.1 SRX1978331 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2000 SRP079914 PRJNA335388 2 335388 SRS1585898 simple 9606 Homo sapiens GSM2252630 no GEO SRA444664 public 5D0D82FE2F3279A41A1D4EB2C2B17FFA 510DABBE66C93B6D6480C487FDAD52DF 5441361 U2OS_Etoposide Epidemiology and Biostatistics, UT Health Science Center at San Antonio 9606 SRS1585898 GSM2252630 U2OS Osteosarcoma Osteosarcoma U2OS 20μM Etoposide for 8 hours U2OS.etoposide_20uM SAMN05441360 SRR3954091 2017-02-13T15:46:23Z 2016-07-26T14:54:06Z 32766971 1671115521 0 51 660 GCA_000001405.13 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos2/sra-pub-run-3/SRR3954091/SRR3954091.1 SRX1978332 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2000 SRP079914 PRJNA335388 2 335388 SRS1585899 simple 9606 Homo sapiens GSM2252631 no GEO SRA444664 public 5A93CAF8A0FA195DE2AC453E0DA3C255 8A03A7B6D1DD8C48149CC28ECF26C1A1 5441360 U2OS_MMS Epidemiology and Biostatistics, UT Health Science Center at San Antonio 9606 SRS1585899 GSM2252631 U2OS Osteosarcoma Osteosarcoma U2OS 40μg/ml MMS for 8 hours U2OS.mms_40ug_ml SAMN05441359 SRR3954092 2017-02-13T15:46:23Z 2016-07-26T14:59:12Z 29877266 1523740566 0 51 607 GCA_000001405.13 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos2/sra-pub-run-3/SRR3954092/SRR3954092.1 SRX1978333 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2000 SRP079914 PRJNA335388 2 335388 SRS1585900 simple 9606 Homo sapiens GSM2252632 no GEO SRA444664 public BF1A975DEB4A21F4777C51F6599DB706 252F80840199BA3F6F5F514EDA0741C8 5441359 U2OS_Paclitaxel Epidemiology and Biostatistics, UT Health Science Center at San Antonio 9606 SRS1585900 GSM2252632 U2OS Osteosarcoma Osteosarcoma U2OS 0.2μM Paclitaxel for 8 hours U2OS.paclitaxel_0.2uM SAMN05591765 SRR4044027 2017-02-13T15:46:23Z 2016-08-19T15:42:55Z 21468231 1073411550 0 50 404 GCA_000001405.13 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos2/sra-pub-run-3/SRR4044027/SRR4044027.1 SRX2034932 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2000 SRP079914 PRJNA335388 2 335388 SRS1628885 simple 9606 Homo sapiens GSM2284967 no GEO SRA444664 public 88D424A1E4ACF70BD55F8841A7E5A8FE 8C80FDB1FC637BFBFEB7B0E4DA20BFEE 5591765 MDA-MB231_Ctrl_8hr Epidemiology and Biostatistics, UT Health Science Center at San Antonio 9606 SRS1628885 GSM2284967 MDA-MB231 Breast cancer (Basal type) Cells were grown in DMEM supplemented with 10%FBS Breast cancer MDA-MB231 DMSO MDA.dmso SAMN05591764 SRR4044028 2017-02-13T15:46:23Z 2016-08-19T15:45:07Z 34120265 1706013250 0 50 666 GCA_000001405.13 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos2/sra-pub-run-3/SRR4044028/SRR4044028.1 SRX2034933 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2000 SRP079914 PRJNA335388 2 335388 SRS1628886 simple 9606 Homo sapiens GSM2284968 no GEO SRA444664 public D2C1549767D827200F36E09B32D920BD 1B273DAC1D520AEB43685A9CA45CF684 5591764 MDA-MB231_MMS_8hr Epidemiology and Biostatistics, UT Health Science Center at San Antonio 9606 SRS1628886 GSM2284968 MDA-MB231 Breast cancer (Basal type) Cells were grown in DMEM supplemented with 10%FBS Breast cancer MDA-MB231 40microg/ml MMS for 8 hours MDA.mms_40ug_ml