BioSample Run ReleaseDate LoadDate spots bases spots_with_mates avgLength size_MB AssemblyName download_path Experiment LibraryName LibraryStrategy LibrarySelection LibrarySource LibraryLayout InsertSize InsertDev Platform Model SRAStudy BioProject Study_Pubmed_id ProjectID Sample SampleType TaxID ScientificName SampleName g1k_pop_code source g1k_analysis_group Subject_ID Sex Disease Tumor Affection_Status Analyte_Type Histological_Type Body_Site CenterName Submission dbgap_study_accession Consent RunHash ReadHash uid title organization taxonomy sra geo cell line shRNA source_name time point treatment group SAMN10343574 SRR8131667 2019-02-22T16:58:13Z 2018-10-29T18:57:19Z 28870473 1472394123 0 51 506 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-16/SRR008/131/SRR8131667.sralite.1 SRX4952773 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994326 simple 9606 Homo sapiens GSM3450400 no GEO SRA800438 public 701C17BC1E735BC4453C414FA2676348 C26EA63F622AA1348ED7BB762F8CFC60 10343574 HepG2_shMETTL14_6h_rep2 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994326 GSM3450400 HepG2 shMETTl14 HepG2 cells 6h 5 ug/mL actinomycin D HepG2.shMETTl14..5.ug.mL.actinomycin.D.6h SAMN10343575 SRR8131647 2019-02-22T16:58:13Z 2018-10-29T18:58:56Z 40522928 2066669328 0 51 705 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131647.sralite.1 SRX4952753 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994306 simple 9606 Homo sapiens GSM3450380 no GEO SRA800438 public EDEC3427035E5EB749B67FCDB22F2676 AF914AB8E83376B00C7A941AD5F027C4 10343575 HepG2_shCtrl_1h_rep2 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994306 GSM3450380 HepG2 non-specific control HepG2 cells 1h 5 ug/mL actinomycin D HepG2.ns_control.5.ug.mL.actinomycin.D.1h SAMN10343576 SRR8131646 2019-02-22T16:58:13Z 2018-10-29T18:57:26Z 34600549 1764627999 0 51 605 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131646.sralite.1 SRX4952752 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994305 simple 9606 Homo sapiens GSM3450379 no GEO SRA800438 public C556C76D312AA8FF5EAE524538FBAC4F B4B94293A6DB844C85ECF1027BEA6611 10343576 HepG2_shCtrl_1h_rep1 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994305 GSM3450379 HepG2 non-specific control HepG2 cells 1h 5 ug/mL actinomycin D HepG2.ns_control.5.ug.mL.actinomycin.D.1h SAMN10343577 SRR8131645 2019-02-22T16:58:13Z 2018-10-29T18:58:13Z 37333141 1903990191 0 51 650 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131645.sralite.1 SRX4952751 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994303 simple 9606 Homo sapiens GSM3450378 no GEO SRA800438 public 7D48961D53D715103522A28F6B744C62 286AADD4BE6D97DA9D47CF4F488416C9 10343577 HepG2_shCtrl_0h_rep2 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994303 GSM3450378 HepG2 non-specific control HepG2 cells 0h untreated HepG2.ns_control.untreated.0h SAMN10343578 SRR8131644 2019-02-22T16:58:13Z 2018-10-29T18:57:01Z 33455619 1706236569 0 51 584 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131644.sralite.1 SRX4952750 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994304 simple 9606 Homo sapiens GSM3450377 no GEO SRA800438 public 58F789725236AF4CBAFF9C1E481A49D7 8831D22DEA23B119A7B961E58E3B7612 10343578 HepG2_shCtrl_0h_rep1 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994304 GSM3450377 HepG2 non-specific control HepG2 cells 0h untreated HepG2.ns_control.untreated.0h SAMN10343579 SRR8131666 2019-02-22T16:58:13Z 2018-10-29T18:57:01Z 33614535 1714341285 0 51 584 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131666.sralite.1 SRX4952772 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994325 simple 9606 Homo sapiens GSM3450399 no GEO SRA800438 public FB6BCBDC735404047F3C0A38E8E8C90F 24DDE64EDE76B4FF81BBF6D325D4EAB7 10343579 HepG2_shMETTL14_6h_rep1 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994325 GSM3450399 HepG2 shMETTl14 HepG2 cells 6h 5 ug/mL actinomycin D HepG2.shMETTl14..5.ug.mL.actinomycin.D.6h SAMN10343580 SRR8131665 2019-02-22T16:58:13Z 2018-10-29T18:59:51Z 43950044 2241452244 0 51 765 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-16/SRR008/131/SRR8131665.sralite.1 SRX4952771 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994324 simple 9606 Homo sapiens GSM3450398 no GEO SRA800438 public 6AD5C29D42250ABBAB641EA1A1AF9CDA 5CADA374498150FEF17394AE3592740F 10343580 HepG2_shMETTL14_3h_rep2 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994324 GSM3450398 HepG2 shMETTl14 HepG2 cells 3h 5 ug/mL actinomycin D HepG2.shMETTl14..5.ug.mL.actinomycin.D.3h SAMN10343581 SRR8131664 2019-02-22T16:58:13Z 2018-10-29T18:59:33Z 37539525 1914515775 0 51 652 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131664.sralite.1 SRX4952770 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994323 simple 9606 Homo sapiens GSM3450397 no GEO SRA800438 public BB07904D3D4C69B709E3A96BFBC3BB78 977459F5A23FEEA902D2DA6A6FB67433 10343581 HepG2_shMETTL14_3h_rep1 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994323 GSM3450397 HepG2 shMETTl14 HepG2 cells 3h 5 ug/mL actinomycin D HepG2.shMETTl14..5.ug.mL.actinomycin.D.3h SAMN10343582 SRR8131663 2019-02-22T16:58:13Z 2018-10-29T18:59:27Z 37825903 1929121053 0 51 658 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-16/SRR008/131/SRR8131663.sralite.1 SRX4952769 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994322 simple 9606 Homo sapiens GSM3450396 no GEO SRA800438 public 77C80C0844AA9E25879C7DB0BAE794F8 1CFCAC8FD5B278249DB938462C9F9C6D 10343582 HepG2_shMETTL14_1h_rep2 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994322 GSM3450396 HepG2 shMETTl14 HepG2 cells 1h 5 ug/mL actinomycin D HepG2.shMETTl14..5.ug.mL.actinomycin.D.1h SAMN10343583 SRR8131662 2019-02-22T16:58:13Z 2018-10-29T18:57:51Z 37396788 1907236188 0 51 653 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131662.sralite.1 SRX4952768 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994321 simple 9606 Homo sapiens GSM3450395 no GEO SRA800438 public DEC9660965B0EE838211310FB5B515FD 1FE9432CCE1900C98DDBDF4AD8A163F1 10343583 HepG2_shMETTL14_1h_rep1 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994321 GSM3450395 HepG2 shMETTl14 HepG2 cells 1h 5 ug/mL actinomycin D HepG2.shMETTl14..5.ug.mL.actinomycin.D.1h SAMN10343584 SRR8131661 2019-02-22T16:58:13Z 2018-10-29T18:58:51Z 35595144 1815352344 0 51 620 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-16/SRR008/131/SRR8131661.sralite.1 SRX4952767 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994320 simple 9606 Homo sapiens GSM3450394 no GEO SRA800438 public 933855B315B79B422E65A5614A31C4A9 50AADD59EE72748F636E867299E6A61E 10343584 HepG2_shMETTL14_0h_rep2 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994320 GSM3450394 HepG2 shMETTl14 HepG2 cells 0h untreated HepG2.shMETTl14..untreated.0h SAMN10343585 SRR8131660 2019-02-22T16:58:13Z 2018-10-29T18:58:32Z 39615937 2020412787 0 51 688 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131660.sralite.1 SRX4952766 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994319 simple 9606 Homo sapiens GSM3450393 no GEO SRA800438 public 6584813E227EF5824822A7F7420B2AE7 07B3321B96378F93C24B45A8168B8D27 10343585 HepG2_shMETTL14_0h_rep1 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994319 GSM3450393 HepG2 shMETTl14 HepG2 cells 0h untreated HepG2.shMETTl14..untreated.0h SAMN10343586 SRR8131659 2019-02-22T16:58:13Z 2018-10-29T18:57:08Z 28139829 1435131279 0 51 489 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131659.sralite.1 SRX4952765 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994318 simple 9606 Homo sapiens GSM3450392 no GEO SRA800438 public E2966F02FAFF6E865EDC89B892E106F3 E723846503B49B36D1D070C009575B51 10343586 HepG2_shSETD2_6h_rep2 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994318 GSM3450392 HepG2 shSETD2 HepG2 cells 6h 5 ug/mL actinomycin D HepG2.shSETD2..5.ug.mL.actinomycin.D.6h SAMN10343587 SRR8131658 2019-02-22T16:58:13Z 2018-10-29T18:55:23Z 31218140 1592125140 0 51 543 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131658.sralite.1 SRX4952764 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994317 simple 9606 Homo sapiens GSM3450391 no GEO SRA800438 public 7BBB1820123D52EE7A32737F8139D61D FE1C779AEAA48AC0DAE80B9A83EB593E 10343587 HepG2_shSETD2_6h_rep1 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994317 GSM3450391 HepG2 shSETD2 HepG2 cells 6h 5 ug/mL actinomycin D HepG2.shSETD2..5.ug.mL.actinomycin.D.6h SAMN10343588 SRR8131657 2019-02-22T16:58:13Z 2018-10-29T18:58:04Z 36835031 1878586581 0 51 641 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131657.sralite.1 SRX4952763 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994315 simple 9606 Homo sapiens GSM3450390 no GEO SRA800438 public F2B7220A9B41E420BD06F7FD75FA9ADA 2FA5D4A55961C5CDFB13B9AEFEEC766A 10343588 HepG2_shSETD2_3h_rep2 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994315 GSM3450390 HepG2 shSETD2 HepG2 cells 3h 5 ug/mL actinomycin D HepG2.shSETD2..5.ug.mL.actinomycin.D.3h SAMN10343589 SRR8131656 2019-02-22T16:58:13Z 2018-10-29T18:57:28Z 35027241 1786389291 0 51 610 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131656.sralite.1 SRX4952762 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994316 simple 9606 Homo sapiens GSM3450389 no GEO SRA800438 public 1492BE09820BD127A3FC5FB2D44A6DF0 C5620A88E8B3B38289227B3EB90242E3 10343589 HepG2_shSETD2_3h_rep1 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994316 GSM3450389 HepG2 shSETD2 HepG2 cells 3h 5 ug/mL actinomycin D HepG2.shSETD2..5.ug.mL.actinomycin.D.3h SAMN10343590 SRR8131655 2019-02-22T16:58:13Z 2018-10-29T18:58:17Z 38389471 1957863021 0 51 669 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-16/SRR008/131/SRR8131655.sralite.1 SRX4952761 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994314 simple 9606 Homo sapiens GSM3450388 no GEO SRA800438 public 61A6499583827DD69F0C922C4DE148E6 3ADF50D25B86B75CBB577A1F9FA88D24 10343590 HepG2_shSETD2_1h_rep2 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 GEO: GSM3450388 HepG2 shSETD2 HepG2 cells 1h 5 ug/mL actinomycin D HepG2.shSETD2..5.ug.mL.actinomycin.D.1h SAMN10343591 SRR8131654 2019-02-22T16:58:13Z 2018-10-29T19:00:08Z 46949634 2394431334 0 51 820 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-16/SRR008/131/SRR8131654.sralite.1 SRX4952760 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994313 simple 9606 Homo sapiens GSM3450387 no GEO SRA800438 public 92873EB09F1CAABE1D7F523FF2F6CEE7 3EE96D73C3C1B01B33DE90DCC7FCC821 10343591 HepG2_shSETD2_1h_rep1 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994313 GSM3450387 HepG2 shSETD2 HepG2 cells 1h 5 ug/mL actinomycin D HepG2.shSETD2..5.ug.mL.actinomycin.D.1h SAMN10343592 SRR8131653 2019-02-22T16:58:13Z 2018-10-29T18:58:45Z 34938879 1781882829 0 51 606 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131653.sralite.1 SRX4952759 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994311 simple 9606 Homo sapiens GSM3450386 no GEO SRA800438 public 62DBEA827B9310C4B4CD2CB95B1C044B 3ED4B634E91C78529435F36B2E681FF1 10343592 HepG2_shSETD2_0h_rep2 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994311 GSM3450386 HepG2 shSETD2 HepG2 cells 0h untreated HepG2.shSETD2..untreated.0h SAMN10343593 SRR8131652 2019-02-22T16:58:13Z 2018-10-29T18:59:17Z 42273265 2155936515 0 51 737 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131652.sralite.1 SRX4952758 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994312 simple 9606 Homo sapiens GSM3450385 no GEO SRA800438 public E634D15B4146D5B53A3B9D94525E654D F2435AB6E712C8B69E7291D086F564F9 10343593 HepG2_shSETD2_0h_rep1 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994312 GSM3450385 HepG2 shSETD2 HepG2 cells 0h untreated HepG2.shSETD2..untreated.0h SAMN10343594 SRR8131651 2019-02-22T16:58:13Z 2018-10-29T18:55:44Z 28605430 1458876930 0 51 497 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131651.sralite.1 SRX4952757 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994310 simple 9606 Homo sapiens GSM3450384 no GEO SRA800438 public 8FCC4B14304EDD2172E3EA5C4413375B 72C1DE176DDF1C670D0CC8C54399C2C1 10343594 HepG2_shCtrl_6h_rep2 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994310 GSM3450384 HepG2 non-specific control HepG2 cells 6h 5 ug/mL actinomycin D HepG2.ns_control.5.ug.mL.actinomycin.D.6h SAMN10343595 SRR8131650 2019-02-22T16:58:13Z 2018-10-29T18:57:05Z 33190988 1692740388 0 51 578 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-22/SRR008/131/SRR8131650.sralite.1 SRX4952756 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994309 simple 9606 Homo sapiens GSM3450383 no GEO SRA800438 public 23F45A34A40B1CBC8EBE1C49812E95F6 8E3D3CEDE604FD42092904891F527048 10343595 HepG2_shCtrl_6h_rep1 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994309 GSM3450383 HepG2 non-specific control HepG2 cells 6h 5 ug/mL actinomycin D HepG2.ns_control.5.ug.mL.actinomycin.D.6h SAMN10343596 SRR8131649 2019-02-22T16:58:13Z 2018-10-29T18:59:22Z 36252663 1848885813 0 51 633 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-16/SRR008/131/SRR8131649.sralite.1 SRX4952755 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994308 simple 9606 Homo sapiens GSM3450382 no GEO SRA800438 public 242BB7D06A988AA03B22DA6F7DAF5346 03AA753787F556875A29F218101FC161 10343596 HepG2_shCtrl_3h_rep2 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994308 GSM3450382 HepG2 non-specific control HepG2 cells 3h 5 ug/mL actinomycin D HepG2.ns_control.5.ug.mL.actinomycin.D.3h SAMN10343597 SRR8131648 2019-02-22T16:58:13Z 2018-10-29T18:56:24Z 36460352 1859477952 0 51 634 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos5/sra-pub-zq-16/SRR008/131/SRR8131648.sralite.1 SRX4952754 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP167173 PRJNA499122 3 499122 SRS3994307 simple 9606 Homo sapiens GSM3450381 no GEO SRA800438 public 685EF6AA83578BC2452A2524191ECA2E 9FBD33F101392FF112C2A79A22159F62 10343597 HepG2_shCtrl_3h_rep1 (RNA-seq) Chen Lab, Systems Biology, City of Hope 9606 SRS3994307 GSM3450381 HepG2 non-specific control HepG2 cells 3h 5 ug/mL actinomycin D HepG2.ns_control.5.ug.mL.actinomycin.D.3h