BioSample Run ReleaseDate LoadDate spots bases spots_with_mates avgLength size_MB AssemblyName download_path Experiment LibraryName LibraryStrategy LibrarySelection LibrarySource LibraryLayout InsertSize InsertDev Platform Model SRAStudy BioProject Study_Pubmed_id ProjectID Sample SampleType TaxID ScientificName SampleName g1k_pop_code source g1k_analysis_group Subject_ID Sex Disease Tumor Affection_Status Analyte_Type Histological_Type Body_Site CenterName Submission dbgap_study_accession Consent RunHash ReadHash uid title organization taxonomy sra geo cell line molecule source_name treatment conditions group SAMN10604697 SRR8334013 2019-07-10T16:35:05Z 2018-12-17T18:39:55Z 149673334 22658102303 149673334 151 8948 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-20/SRR8334013/SRR8334013.1 SRX5145531 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155910 simple 9606 Homo sapiens GSM3518105 no GEO SRA824487 public A2BA832E8DA830F0512506AD1CCA8118 9CE87861021F3BD1928299DF28D790BB 10604697 TT-seq_K562_Ctrl_rep1 MPI 9606 SRS4155910 GSM3518105 K562 4sU-labeled RNA K562 erythroleukemia cells 37 oC, 4sU (Sigma) labeling for 5 minutes. K562.4sU_labeled_RNA.37_oC SAMN10604696 SRR8334014 2019-07-10T16:35:05Z 2018-12-17T18:58:05Z 151253343 22897005898 151253343 151 8966 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-21/SRR8334014/SRR8334014.1 SRX5145532 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155911 simple 9606 Homo sapiens GSM3518106 no GEO SRA824487 public A26730DA653CCD62B93FF79D1A61F3FE 9237E7EAB8384648CE086658DBEDA77A 10604696 TT-seq_K562_Ctrl_rep2 MPI 9606 SRS4155911 GSM3518106 K562 4sU-labeled RNA K562 erythroleukemia cells 37 oC, 4sU (Sigma) labeling for 5 minutes. K562.4sU_labeled_RNA.37_oC SAMN10604695 SRR8334015 2019-07-10T16:35:05Z 2018-12-17T18:41:25Z 161455492 24435140753 161455492 151 9580 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-19/SRR8334015/SRR8334015.1 SRX5145533 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155912 simple 9606 Homo sapiens GSM3518107 no GEO SRA824487 public 0C9E0930E5A5A7020BBB1B37D31F3E88 A181CC6B24C654126725F10DDBE1D5CE 10604695 TT-seq_K562_HS15_rep1 MPI 9606 SRS4155912 GSM3518107 K562 4sU-labeled RNA K562 erythroleukemia cells 42 oC for 15 min; incl. 4sU (Sigma) labeling during the last 5 minutes. K562.4sU_labeled_RNA.42_oC_15min SAMN10604694 SRR8334016 2019-07-10T16:35:05Z 2018-12-17T18:30:53Z 157619872 23855899802 157619872 151 9367 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-19/SRR8334016/SRR8334016.1 SRX5145534 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155913 simple 9606 Homo sapiens GSM3518108 no GEO SRA824487 public BA3278B5FB917F6BE8EF5CD39562CF77 2BA8A7AAF0818A2819D73FD1EF83BF74 10604694 TT-seq_K562_HS15_rep2 MPI 9606 SRS4155913 GSM3518108 K562 4sU-labeled RNA K562 erythroleukemia cells 42 oC for 15 min; incl. 4sU (Sigma) labeling during the last 5 minutes. K562.4sU_labeled_RNA.42_oC_15min SAMN10604692 SRR8334017 2019-07-10T16:35:05Z 2018-12-17T18:29:15Z 147638717 22349502333 147638717 151 8782 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-21/SRR8334017/SRR8334017.1 SRX5145535 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155914 simple 9606 Homo sapiens GSM3518109 no GEO SRA824487 public CD2510810494A584D1F643AD1726DC89 E953CF5A52597EFA967C5BDBEEA80F9E 10604692 TT-seq_K562_HS30__rep1 MPI 9606 SRS4155914 GSM3518109 K562 4sU-labeled RNA K562 erythroleukemia cells 42 oC for 30 min; incl. 4sU (Sigma) labeling during the last 5 minutes. K562.4sU_labeled_RNA.42_oC_30min SAMN10604691 SRR8334018 2019-07-10T16:35:05Z 2018-12-17T18:40:42Z 170970259 25871881096 170970259 151 10126 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-21/SRR8334018/SRR8334018.1 SRX5145536 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155915 simple 9606 Homo sapiens GSM3518110 no GEO SRA824487 public D4C4457FB0980D26D46EA8C6DBBE2836 E8EC3A7D16AB25BC0CEA797E5832BF18 10604691 TT-seq_K562_HS30_rep2 MPI 9606 SRS4155915 GSM3518110 K562 4sU-labeled RNA K562 erythroleukemia cells 42 oC for 30 min; incl. 4sU (Sigma) labeling during the last 5 minutes. K562.4sU_labeled_RNA.42_oC_30min SAMN10604690 SRR8334019 2019-07-10T16:35:05Z 2018-12-17T18:04:24Z 102213680 15536479360 102213680 152 5957 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-21/SRR8334019/SRR8334019.1 SRX5145537 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155916 simple 9606 Homo sapiens GSM3518111 no GEO SRA824487 public 1697C2CD9EA5B596B59BAD87E5BDE80B A2860729CABECA554BB33893D205B6BF 10604690 RNA-seq_K562_Ctrl_rep1 MPI 9606 SRS4155916 GSM3518111 K562 Total fragmented RNA K562 erythroleukemia cells 4sU (Sigma) labeling for 5 minutes. K562.Total_fragmented_RNA.4sU SAMN10604689 SRR8334020 2019-07-10T16:35:05Z 2018-12-17T18:05:44Z 107355413 16318022776 107355413 152 6268 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-20/SRR8334020/SRR8334020.1 SRX5145538 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155917 simple 9606 Homo sapiens GSM3518112 no GEO SRA824487 public 2619A6713610D8E0EBD88573FC6F9C78 884393A2DCD5ECE7CEAA9101EAF50EB2 10604689 RNA-seq_K562_Ctrl_rep2 MPI 9606 SRS4155917 GSM3518112 K562 Total fragmented RNA K562 erythroleukemia cells 4sU (Sigma) labeling for 5 minutes. K562.Total_fragmented_RNA.4sU SAMN10604688 SRR8334021 2019-07-10T16:35:05Z 2018-12-17T18:01:57Z 100709060 15307777120 100709060 152 5843 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-21/SRR8334021/SRR8334021.1 SRX5145539 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155918 simple 9606 Homo sapiens GSM3518113 no GEO SRA824487 public 824281ACBAF1EF235A561123454DA3D1 9FB46341252D97DEFA3E5CB07810476C 10604688 RNA-seq_K562_HS15_rep1 MPI 9606 SRS4155918 GSM3518113 K562 Total fragmented RNA K562 erythroleukemia cells 4sU (Sigma) labeling for 5 minutes. K562.Total_fragmented_RNA.4sU SAMN10604687 SRR8334022 2019-07-10T16:35:05Z 2018-12-17T18:02:08Z 105407471 16021935592 105407471 152 6138 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-20/SRR8334022/SRR8334022.1 SRX5145540 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155919 simple 9606 Homo sapiens GSM3518114 no GEO SRA824487 public 3E3783F22EC185BD4822AE542785FBEF 1CA3D03C55E01B989D5B55C37080661F 10604687 RNA-seq_K562_HS15_rep2 MPI 9606 SRS4155919 GSM3518114 K562 Total fragmented RNA K562 erythroleukemia cells 4sU (Sigma) labeling for 5 minutes. K562.Total_fragmented_RNA.4sU SAMN10604686 SRR8334023 2019-07-10T16:35:05Z 2018-12-17T18:06:02Z 108465109 16486696568 108465109 152 6310 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-21/SRR8334023/SRR8334023.1 SRX5145541 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155920 simple 9606 Homo sapiens GSM3518115 no GEO SRA824487 public D3C3DFA0ACA5DEFFCED73BB43B50789E E8BDD3FD5AFBFE6AE87FAF5941EF0DF8 10604686 RNA-seq_K562_HS30__rep1 MPI 9606 SRS4155920 GSM3518115 K562 Total fragmented RNA K562 erythroleukemia cells 4sU (Sigma) labeling for 5 minutes. K562.Total_fragmented_RNA.4sU SAMN10604685 SRR8334024 2019-07-10T16:35:05Z 2018-12-17T18:04:57Z 105327756 16009818912 105327756 152 6129 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-19/SRR8334024/SRR8334024.1 SRX5145542 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155921 simple 9606 Homo sapiens GSM3518116 no GEO SRA824487 public EF5A529CEDEDE6EF682C1091C07EB354 313FC9FB766A23718358141E53A1443B 10604685 RNA-seq_K562_HS30_rep2 MPI 9606 SRS4155921 GSM3518116 K562 Total fragmented RNA K562 erythroleukemia cells 4sU (Sigma) labeling for 5 minutes. K562.Total_fragmented_RNA.4sU SAMN10604677 SRR8334031 2019-07-10T16:35:05Z 2018-12-17T17:37:18Z 57249175 8644874071 57249175 151 3334 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-19/SRR8334031/SRR8334031.1 SRX5145549 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155928 simple 9606 Homo sapiens GSM3518123 no GEO SRA824487 public 2688E3F4B9461776477DCAB9198BBD18 1E8675BFF2B7D01B3D937031366BA70B 10604677 TT-seq_Raji-CDK9as_Solvent_rep1 MPI 9606 SRS4155928 GSM3518123 Raji Burkitt's (B) lymphoma cells (CDK9as) 4sU-labeled RNA Raji Burkitt's (B) lymphoma cells (CDK9as) DMSO for 35 min; incl. 4sU (Sigma) labeling during the last 5 minutes. Raji_CDK9as.4sU_labeled_RNA.DMSO_4sU SAMN10604676 SRR8334032 2019-07-10T16:35:05Z 2018-12-17T17:49:30Z 76191286 11505186771 76191286 151 4456 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos1/sra-pub-run-16/SRR8334032/SRR8334032.1 SRX5145550 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155929 simple 9606 Homo sapiens GSM3518124 no GEO SRA824487 public DA93508EE8C6AD8DB8D353B4CDB0B09E 7A83503CC0826B1F8DB6276122C15851 10604676 TT-seq_Raji-CDK9as_Solvent_rep2 MPI 9606 SRS4155929 GSM3518124 Raji Burkitt's (B) lymphoma cells (CDK9as) 4sU-labeled RNA Raji Burkitt's (B) lymphoma cells (CDK9as) DMSO for 35 min; incl. 4sU (Sigma) labeling during the last 5 minutes. Raji_CDK9as.4sU_labeled_RNA.DMSO_4sU SAMN10604675 SRR8334033 2019-07-10T16:35:05Z 2018-12-17T17:49:42Z 70801390 10689623626 70801390 150 4092 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos1/sra-pub-run-16/SRR8334033/SRR8334033.1 SRX5145551 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155930 simple 9606 Homo sapiens GSM3518125 no GEO SRA824487 public 7F132A02748C6A116405E698E41BBE89 D31265DD600FB44399FBE6961ED4E388 10604675 TT-seq_Raji-CDK9as_CDK9inhibited_rep1 MPI 9606 SRS4155930 GSM3518125 Raji Burkitt's (B) lymphoma cells (CDK9as) 4sU-labeled RNA Raji Burkitt's (B) lymphoma cells (CDK9as) 5 uM 1-NA-PP1 for 35 min; incl. 4sU (Sigma) labeling during the last 5 minutes. Raji_CDK9as.4sU_labeled_RNA.1_NA_PP1_4sU SAMN10604702 SRR8334034 2019-07-10T16:35:05Z 2018-12-17T17:40:18Z 67661931 10216685116 67661931 150 3938 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-run-21/SRR8334034/SRR8334034.1 SRX5145552 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155931 simple 9606 Homo sapiens GSM3518126 no GEO SRA824487 public 8A148D123D20F08ABC66C5E31368C90D 238C63F3C804B280565191B06092D27A 10604702 TT-seq_Raji-CDK9as_CDK9inhibited_rep2 MPI 9606 SRS4155931 GSM3518126 Raji Burkitt's (B) lymphoma cells (CDK9as) 4sU-labeled RNA Raji Burkitt's (B) lymphoma cells (CDK9as) 5 uM 1-NA-PP1 for 35 min; incl. 4sU (Sigma) labeling during the last 5 minutes. Raji_CDK9as.4sU_labeled_RNA.1_NA_PP1_4sU SAMN10604701 SRR8334035 2019-07-10T16:35:05Z 2018-12-17T17:47:11Z 70180248 10596980926 70180248 150 4080 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos1/sra-pub-run-16/SRR8334035/SRR8334035.1 SRX5145553 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155932 simple 9606 Homo sapiens GSM3518127 no GEO SRA824487 public F8BB4507FD3CAD4AD7F950E8710830EA 87ACBC8FADD19B20D4161FF6CE20732F 10604701 TT-seq_Raji-CDK9as_Solvent_HS30_rep1 MPI 9606 SRS4155932 GSM3518127 Raji Burkitt's (B) lymphoma cells (CDK9as) 4sU-labeled RNA Raji Burkitt's (B) lymphoma cells (CDK9as) DMSO for 35 min; 42 oC for 30 min; incl. 4sU (Sigma) labeling during the last 5 minutes. Raji_CDK9as.4sU_labeled_RNA.DMSO_4sU SAMN10604700 SRR8334036 2019-07-10T16:35:05Z 2018-12-17T17:49:45Z 74373094 11229884908 74373094 150 4325 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos1/sra-pub-run-16/SRR8334036/SRR8334036.1 SRX5145554 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155933 simple 9606 Homo sapiens GSM3518128 no GEO SRA824487 public 3F8B6DC43D09AE883D136D7DF8C6A85F FFFFA0BC849AE7B5BB7F04318D443544 10604700 TT-seq_Raji-CDK9as_Solvent_HS30_rep2 MPI 9606 SRS4155933 GSM3518128 Raji Burkitt's (B) lymphoma cells (CDK9as) 4sU-labeled RNA Raji Burkitt's (B) lymphoma cells (CDK9as) DMSO for 35 min; 42 oC for 30 min; incl. 4sU (Sigma) labeling during the last 5 minutes. Raji_CDK9as.4sU_labeled_RNA.DMSO_4sU SAMN10604699 SRR8334037 2019-07-10T16:35:05Z 2018-12-17T17:52:23Z 82625021 12474793425 82625021 150 4803 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos1/sra-pub-run-16/SRR8334037/SRR8334037.1 SRX5145555 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155934 simple 9606 Homo sapiens GSM3518129 no GEO SRA824487 public BE3FB05F149E30D10EDCCF1FB207BF3A F3FB8ED413A4627762C96EF8654FC4C2 10604699 TT-seq_Raji-CDK9as_CDK9inhibited_HS30_rep1 MPI 9606 SRS4155934 GSM3518129 Raji Burkitt's (B) lymphoma cells (CDK9as) 4sU-labeled RNA Raji Burkitt's (B) lymphoma cells (CDK9as) 5 uM 1-NA-PP1 for 35 min; 42 oC for 30 min; incl. 4sU (Sigma) labeling during the last 5 minutes. Raji_CDK9as.4sU_labeled_RNA.1_NA_PP1_4sU SAMN10604698 SRR8334038 2019-07-10T16:35:05Z 2018-12-17T17:51:39Z 77366563 11680136350 77366563 150 4478 https://sra-downloadb.st-va.ncbi.nlm.nih.gov/sos1/sra-pub-run-16/SRR8334038/SRR8334038.1 SRX5145556 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA NextSeq 500 SRP173667 PRJNA510428 3 510428 SRS4155935 simple 9606 Homo sapiens GSM3518130 no GEO SRA824487 public E4840D2ADEEC2F13F89CE4A530A470D5 048A8076E65602705F6C7899B78E308E 10604698 TT-seq_Raji-CDK9as_CDK9inhibited_HS30_rep2 MPI 9606 SRS4155935 GSM3518130 Raji Burkitt's (B) lymphoma cells (CDK9as) 4sU-labeled RNA Raji Burkitt's (B) lymphoma cells (CDK9as) 5 uM 1-NA-PP1 for 35 min; 42 oC for 30 min; incl. 4sU (Sigma) labeling during the last 5 minutes. Raji_CDK9as.4sU_labeled_RNA.1_NA_PP1_4sU