BioSample Run ReleaseDate LoadDate spots bases spots_with_mates avgLength size_MB AssemblyName download_path Experiment LibraryName LibraryStrategy LibrarySelection LibrarySource LibraryLayout InsertSize InsertDev Platform Model SRAStudy BioProject Study_Pubmed_id ProjectID Sample SampleType TaxID ScientificName SampleName g1k_pop_code source g1k_analysis_group Subject_ID Sex Disease Tumor Affection_Status Analyte_Type Histological_Type Body_Site CenterName Submission dbgap_study_accession Consent RunHash ReadHash uid title organization taxonomy sra geo cell line cell type genotype/variation source_name subtype tissue transfection treatment tumor source group SAMN11099148 SRR8707507 2022-03-03T18:27:32Z 2019-03-11T10:03:51Z 38540022 1927001100 0 50 962 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR008/8707/SRR8707507/SRR8707507.lite.1 SRX5502927 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP188083 PRJNA526455 526455 SRS4471515 simple 9606 Homo sapiens GSM3664922 no GEO SRA858440 public 30FF28D01950FBAD524960C4FA2BCB43 2B648EB4B3131C4777CAF9B7D6413754 11099148 SUM159_shE4F1_GEM_rep3 Genetic and phenotypic plasticity of cancer team, IRCM 9606 SRS4471515 GSM3664922 SUM159 Breast cancer cell line down regulation E4F1 SUM159 cells Triple negative breast cancer mammary gland; breast shE4F1 Gemcitabine treated Primary tumor SUM159.shE4F1.Gemcitabine.treated.24hr SAMN11099149 SRR8707506 2022-03-03T18:27:32Z 2019-03-11T10:03:38Z 37156172 1857808600 0 50 910 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR008/8707/SRR8707506/SRR8707506.lite.1 SRX5502926 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP188083 PRJNA526455 526455 SRS4471514 simple 9606 Homo sapiens GSM3664921 no GEO SRA858440 public 3F56604506C4A768D400028CC941B9DE 0319A3B5761CC91BA385344E6F824A52 11099149 SUM159_shCTRL_GEM_rep3 Genetic and phenotypic plasticity of cancer team, IRCM 9606 SRS4471514 GSM3664921 SUM159 Breast cancer cell line "" SUM159 cells Triple negative breast cancer mammary gland; breast shCTRL Gemcitabine treated Primary tumor SUM159.shCTRL.Gemcitabine.treated.24hr SAMN11099150 SRR8707505 2022-03-03T18:27:32Z 2019-03-11T10:05:17Z 46711561 2335578050 0 50 1143 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR008/8707/SRR8707505/SRR8707505.lite.1 SRX5502925 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP188083 PRJNA526455 526455 SRS4471513 simple 9606 Homo sapiens GSM3664920 no GEO SRA858440 public ABFE16E69C8683D6A3B2B7562BF0045C 28EDE8F0312B935E2AD4456C4B3C176D 11099150 SUM159_shCTRL_NT_rep3 Genetic and phenotypic plasticity of cancer team, IRCM 9606 SRS4471513 GSM3664920 SUM159 Breast cancer cell line "" SUM159 cells Triple negative breast cancer mammary gland; breast shCTRL Untreated Primary tumor SUM159.shCTRL.Untreated.24hr SAMN11099151 SRR8707504 2022-03-03T18:27:32Z 2019-03-11T10:04:59Z 56009753 2800487650 0 50 1373 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR008/8707/SRR8707504/SRR8707504.lite.1 SRX5502924 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP188083 PRJNA526455 526455 SRS4471512 simple 9606 Homo sapiens GSM3664919 no GEO SRA858440 public 5955C99A53AEB7970685ABB94422EE22 FFE40CF895555781CF6FADC5B74AE15B 11099151 SUM159_shE4F1_NT_rep2 Genetic and phenotypic plasticity of cancer team, IRCM 9606 SRS4471512 GSM3664919 SUM159 Breast cancer cell line down regulation E4F1 SUM159 cells Triple negative breast cancer mammary gland; breast shE4F1 Untreated Primary tumor SUM159.shE4F1.Untreated.24hr SAMN11099152 SRR8707503 2022-03-03T18:27:32Z 2019-03-11T10:04:46Z 54443717 2722185850 0 50 1331 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR008/8707/SRR8707503/SRR8707503.lite.1 SRX5502923 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP188083 PRJNA526455 526455 SRS4471511 simple 9606 Homo sapiens GSM3664918 no GEO SRA858440 public ACB97858B6775AEF068ECBD5EA448095 F2E933B40BA8BB43389852EF5D97F4DF 11099152 SUM159_shE4F1_GEM_rep2 Genetic and phenotypic plasticity of cancer team, IRCM 9606 SRS4471511 GSM3664918 SUM159 Breast cancer cell line down regulation E4F1 SUM159 cells Triple negative breast cancer mammary gland; breast shE4F1 Gemcitabine treated Primary tumor SUM159.shE4F1.Gemcitabine.treated.24hr SAMN11099153 SRR8707502 2022-03-03T18:27:32Z 2019-03-11T10:04:21Z 50434723 2521736150 0 50 1255 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR008/8707/SRR8707502/SRR8707502.lite.1 SRX5502922 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP188083 PRJNA526455 526455 SRS4471510 simple 9606 Homo sapiens GSM3664917 no GEO SRA858440 public B66C2650CECFCAF3E0F58648CCDD834C 1B389D6245761868208A61D5C468F551 11099153 SUM159_shCTRL_GEM_rep2 Genetic and phenotypic plasticity of cancer team, IRCM 9606 SRS4471510 GSM3664917 SUM159 Breast cancer cell line "" SUM159 cells Triple negative breast cancer mammary gland; breast shCTRL Gemcitabine treated Primary tumor SUM159.shCTRL.Gemcitabine.treated.24hr SAMN11099154 SRR8707501 2022-03-03T18:27:32Z 2019-03-11T10:04:28Z 46272933 2313646650 0 50 1159 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR008/8707/SRR8707501/SRR8707501.lite.1 SRX5502921 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP188083 PRJNA526455 526455 SRS4471509 simple 9606 Homo sapiens GSM3664916 no GEO SRA858440 public 2D967CD933A3CBC57F7EEC30FF2C6CE5 1B5928539B251444339BA5940569A4D6 11099154 SUM159_shCTRL_NT_rep2 Genetic and phenotypic plasticity of cancer team, IRCM 9606 SRS4471509 GSM3664916 SUM159 Breast cancer cell line "" SUM159 cells Triple negative breast cancer mammary gland; breast shCTRL Untreated Primary tumor SUM159.shCTRL.Untreated.24hr SAMN11099155 SRR8707500 2022-03-03T18:27:32Z 2019-03-11T10:03:24Z 43522254 2176112700 0 50 1082 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR008/8707/SRR8707500/SRR8707500.lite.1 SRX5502920 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP188083 PRJNA526455 526455 SRS4471508 simple 9606 Homo sapiens GSM3664915 no GEO SRA858440 public DEF7907ACEEEFB38F956913716D7054C 3A308A42E710DE57B9A47E9DD8C15223 11099155 SUM159_shE4F1_GEM_rep1 Genetic and phenotypic plasticity of cancer team, IRCM 9606 SRS4471508 GSM3664915 SUM159 Breast cancer cell line down regulation E4F1 SUM159 cells Triple negative breast cancer mammary gland; breast shE4F1 Gemcitabine treated Primary tumor SUM159.shE4F1.Gemcitabine.treated.24hr SAMN11099156 SRR8707499 2022-03-03T18:27:32Z 2019-03-11T10:03:09Z 36813198 1840659900 0 50 925 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-1/SRR008/8707/SRR8707499/SRR8707499.lite.1 SRX5502919 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP188083 PRJNA526455 526455 SRS4471507 simple 9606 Homo sapiens GSM3664914 no GEO SRA858440 public 236F1A523AAAC2114D2567165E1E94AA C211553144F33FBDFBBA82539295C367 11099156 SUM159_shE4F1_NT_rep1 Genetic and phenotypic plasticity of cancer team, IRCM 9606 SRS4471507 GSM3664914 SUM159 Breast cancer cell line down regulation E4F1 SUM159 cells Triple negative breast cancer mammary gland; breast shE4F1 Untreated Primary tumor SUM159.shE4F1.Untreated.24hr SAMN11099157 SRR8707498 2022-03-03T18:27:32Z 2019-03-11T10:04:06Z 51715246 2585762300 0 50 1284 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR008/8707/SRR8707498/SRR8707498.lite.1 SRX5502918 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP188083 PRJNA526455 526455 SRS4471506 simple 9606 Homo sapiens GSM3664913 no GEO SRA858440 public 86A760CD2482D4213BEA8BD741F9A03B CF97328B7AA3A606E7B7B995BA80D9AA 11099157 SUM159_shCTRL_GEM_rep1 Genetic and phenotypic plasticity of cancer team, IRCM 9606 SRS4471506 GSM3664913 SUM159 Breast cancer cell line "" SUM159 cells Triple negative breast cancer mammary gland; breast shCTRL Gemcitabine treated Primary tumor SUM159.shCTRL.Gemcitabine.treated.24hr SAMN11099158 SRR8707497 2022-03-03T18:27:32Z 2019-03-11T10:04:04Z 48510486 2425524300 0 50 1204 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR008/8707/SRR8707497/SRR8707497.lite.1 SRX5502917 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP188083 PRJNA526455 526455 SRS4471505 simple 9606 Homo sapiens GSM3664912 no GEO SRA858440 public 10B0538D66BBFD615DF9C280D47EDCE3 5AA8C525E54459D7810ADC6813641590 11099158 SUM159_shCTRL_NT_rep1 Genetic and phenotypic plasticity of cancer team, IRCM 9606 SRS4471505 GSM3664912 SUM159 Breast cancer cell line "" SUM159 cells Triple negative breast cancer mammary gland; breast shCTRL Untreated Primary tumor SUM159.shCTRL.Untreated.24hr SAMN11099159 SRR8707508 2022-03-03T18:27:32Z 2019-03-11T10:03:01Z 31410209 1570510450 0 50 772 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos4/sra-pub-zq-1/SRR008/8707/SRR8707508/SRR8707508.lite.1 SRX5502928 RNA-Seq cDNA TRANSCRIPTOMIC SINGLE 0 0 ILLUMINA Illumina HiSeq 2500 SRP188083 PRJNA526455 526455 SRS4471516 simple 9606 Homo sapiens GSM3664923 no GEO SRA858440 public DBB76D43C07C0C63C2D2F976A42ECC06 F31FE7BBB3F7DA4CFF56FC7B66B1B4C9 11099159 SUM159_shE4F1_NT_rep3 Genetic and phenotypic plasticity of cancer team, IRCM 9606 SRS4471516 GSM3664923 SUM159 Breast cancer cell line down regulation E4F1 SUM159 cells Triple negative breast cancer mammary gland; breast shE4F1 Untreated Primary tumor SUM159.shE4F1.Untreated.24hr