BioSample Run ReleaseDate LoadDate spots bases spots_with_mates avgLength size_MB AssemblyName download_path Experiment LibraryName LibraryStrategy LibrarySelection LibrarySource LibraryLayout InsertSize InsertDev Platform Model SRAStudy BioProject Study_Pubmed_id ProjectID Sample SampleType TaxID ScientificName SampleName g1k_pop_code source g1k_analysis_group Subject_ID Sex Disease Tumor Affection_Status Analyte_Type Histological_Type Body_Site CenterName Submission dbgap_study_accession Consent RunHash ReadHash uid title organization taxonomy sra geo cell line cell type source_name treatment treatment time group SAMN23489552 SRR17063404 2022-08-24T19:25:32Z 2021-11-29T10:46:22Z 40144237 12043271100 40144237 300 3788 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-24/SRR017/17063/SRR17063404/SRR17063404.lite.1 SRX13252242 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA Illumina NovaSeq 6000 SRP348371 PRJNA784440 3 784440 SRS11175095 simple 9606 Homo sapiens GSM5706915 no GEO SRA1335844 public 7C2FCDE4D3646E98F4D0431744CD8317 BBC13B479975FBBB36556F4F901A7F23 23489552 Control 1 [C1] Houston Methodist Research Institute 9606 SRS11175095 GSM5706915 MIA PaCa-2 pancreatic ductal adenocarcinoma cells pancreatic ductal adenocarcinoma cells Untreated None MIA.PaCa.2.Untreated.None SAMN23489553 SRR17063405 2022-08-24T19:25:32Z 2021-11-29T10:55:30Z 39889475 11966842500 39889475 300 3759 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-20/SRR017/17063/SRR17063405/SRR17063405.lite.1 SRX13252243 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA Illumina NovaSeq 6000 SRP348371 PRJNA784440 3 784440 SRS11175096 simple 9606 Homo sapiens GSM5706916 no GEO SRA1335844 public 072030CBC23412031373CC7C79AEA160 E9ACE5D939D1B143366C52E3D69468C6 23489553 Control 2 [C2] Houston Methodist Research Institute 9606 SRS11175096 GSM5706916 MIA PaCa-2 pancreatic ductal adenocarcinoma cells pancreatic ductal adenocarcinoma cells Untreated None MIA.PaCa.2.Untreated.None SAMN23489554 SRR17063406 2022-08-24T19:25:32Z 2021-11-29T10:59:17Z 41241521 12372456300 41241521 300 3868 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR017/17063/SRR17063406/SRR17063406.lite.1 SRX13252244 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA Illumina NovaSeq 6000 SRP348371 PRJNA784440 3 784440 SRS11175097 simple 9606 Homo sapiens GSM5706917 no GEO SRA1335844 public C435738CE693801F6CA5CAB7FFEC76B9 1247D2A366603103E57D3B77B1F80907 23489554 Control 3 [C3] Houston Methodist Research Institute 9606 SRS11175097 GSM5706917 MIA PaCa-2 pancreatic ductal adenocarcinoma cells pancreatic ductal adenocarcinoma cells Untreated None MIA.PaCa.2.Untreated.None SAMN23489555 SRR17063407 2022-08-24T19:25:32Z 2021-11-29T10:56:37Z 40400103 12120030900 40400103 300 3777 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos3/sra-pub-zq-24/SRR017/17063/SRR17063407/SRR17063407.lite.1 SRX13252245 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA Illumina NovaSeq 6000 SRP348371 PRJNA784440 3 784440 SRS11175098 simple 9606 Homo sapiens GSM5706918 no GEO SRA1335844 public 6A346CCF37820206F518CBA8B207FD8F E077026E8EBF67971DE9D69EC9D24F09 23489555 Torin1-treated 1 [T1] Houston Methodist Research Institute 9606 SRS11175098 GSM5706918 MIA PaCa-2 pancreatic ductal adenocarcinoma cells pancreatic ductal adenocarcinoma cells Torin 1 (100 nM) 9 days MIA.PaCa.2.Torin.1..100.nM..9.days SAMN23489556 SRR17063408 2022-08-24T19:25:32Z 2021-11-29T10:55:16Z 41228463 12368538900 41228463 300 3834 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR017/17063/SRR17063408/SRR17063408.lite.1 SRX13252246 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA Illumina NovaSeq 6000 SRP348371 PRJNA784440 3 784440 SRS11175099 simple 9606 Homo sapiens GSM5706919 no GEO SRA1335844 public 88BABFEEF3C04C0E7FA602FCA3A0E03F 9CC3DDFFBDE97FE56D7BCF0115E03858 23489556 Torin1-treated 2 [T2] Houston Methodist Research Institute 9606 SRS11175099 GSM5706919 MIA PaCa-2 pancreatic ductal adenocarcinoma cells pancreatic ductal adenocarcinoma cells Torin 1 (100 nM) 9 days MIA.PaCa.2.Torin.1..100.nM..9.days SAMN23489557 SRR17063409 2022-08-24T19:25:32Z 2021-11-29T10:53:39Z 42877794 12863338200 42877794 300 3999 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR017/17063/SRR17063409/SRR17063409.lite.1 SRX13252247 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA Illumina NovaSeq 6000 SRP348371 PRJNA784440 3 784440 SRS11175101 simple 9606 Homo sapiens GSM5706920 no GEO SRA1335844 public 41349A15E4017359FACD3ACC1579A769 86D54ECA1BBF80F03869B55D0CB8A00E 23489557 Torin1-treated 3 [T3] Houston Methodist Research Institute 9606 SRS11175101 GSM5706920 MIA PaCa-2 pancreatic ductal adenocarcinoma cells pancreatic ductal adenocarcinoma cells Torin 1 (100 nM) 9 days MIA.PaCa.2.Torin.1..100.nM..9.days SAMN23489558 SRR17063410 2022-08-24T19:25:32Z 2021-11-29T10:57:39Z 39513917 11854175100 39513917 300 3702 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR017/17063/SRR17063410/SRR17063410.lite.1 SRX13252248 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA Illumina NovaSeq 6000 SRP348371 PRJNA784440 3 784440 SRS11175100 simple 9606 Homo sapiens GSM5706921 no GEO SRA1335844 public 409604DC6986B21CC733E73611340A80 6E8C4A8774E7E8430BB25C154AB6A02F 23489558 Persisters 1 [gT1] Houston Methodist Research Institute 9606 SRS11175100 GSM5706921 MIA PaCa-2 pancreatic ductal adenocarcinoma cells pancreatic ductal adenocarcinoma cells Gemcitabine (100 nM) plus Torin 1 (100 nM) 9 days MIA.PaCa.2.Gemcitabine..100.nM..plus.Torin.1..100.nM..9.days SAMN23489559 SRR17063411 2022-08-24T19:25:32Z 2021-11-29T11:09:58Z 51657656 15497296800 51657656 300 4808 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-18/SRR017/17063/SRR17063411/SRR17063411.lite.1 SRX13252249 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA Illumina NovaSeq 6000 SRP348371 PRJNA784440 3 784440 SRS11175103 simple 9606 Homo sapiens GSM5706922 no GEO SRA1335844 public 8F378CE7020DFE370C06FC2148DDD9BC 001F3A40B6735976953138669041B0DB 23489559 Persisters 2 [gT2] Houston Methodist Research Institute 9606 SRS11175103 GSM5706922 MIA PaCa-2 pancreatic ductal adenocarcinoma cells pancreatic ductal adenocarcinoma cells Gemcitabine (100 nM) plus Torin 1 (100 nM) 9 days MIA.PaCa.2.Gemcitabine..100.nM..plus.Torin.1..100.nM..9.days SAMN23489560 SRR17063412 2022-08-24T19:25:32Z 2021-11-29T10:48:07Z 42668156 12800446800 42668156 300 3971 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR017/17063/SRR17063412/SRR17063412.lite.1 SRX13252250 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA Illumina NovaSeq 6000 SRP348371 PRJNA784440 3 784440 SRS11175106 simple 9606 Homo sapiens GSM5706923 no GEO SRA1335844 public 1DE82C14BD720B7D82598D798DEC6415 AADCB62551B0EA6BA3254CDBC1BA13B3 23489560 Persisters 3 [gT3] Houston Methodist Research Institute 9606 SRS11175106 GSM5706923 MIA PaCa-2 pancreatic ductal adenocarcinoma cells pancreatic ductal adenocarcinoma cells Gemcitabine (100 nM) plus Torin 1 (100 nM) 9 days MIA.PaCa.2.Gemcitabine..100.nM..plus.Torin.1..100.nM..9.days SAMN23489561 SRR17063413 2022-08-24T19:25:32Z 2021-11-29T10:58:57Z 41875524 12562657200 41875524 300 3921 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR017/17063/SRR17063413/SRR17063413.lite.1 SRX13252251 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA Illumina NovaSeq 6000 SRP348371 PRJNA784440 3 784440 SRS11175104 simple 9606 Homo sapiens GSM5706924 no GEO SRA1335844 public 8A5B4B5CBDE8CE005B11FD25FA9FC1C9 04C31677413D7CB71AFA35DDF8177711 23489561 Recovery 1 [R1] Houston Methodist Research Institute 9606 SRS11175104 GSM5706924 MIA PaCa-2 pancreatic ductal adenocarcinoma cells pancreatic ductal adenocarcinoma cells Gemcitabine (100 nM) plus Torin 1 (100 nM) 9 days followed by culture in drug-free normal media for 12 days MIA.PaCa.2.Gemcitabine..100.nM..plus.Torin.1..100.nM..9.day.plus.drug.free.normal.12.days SAMN23489562 SRR17063414 2022-08-24T19:25:32Z 2021-11-29T10:57:45Z 42423231 12726969300 42423231 300 3985 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos1/sra-pub-zq-38/SRR017/17063/SRR17063414/SRR17063414.lite.1 SRX13252252 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA Illumina NovaSeq 6000 SRP348371 PRJNA784440 3 784440 SRS11175102 simple 9606 Homo sapiens GSM5706925 no GEO SRA1335844 public ABB46D02F08B30FCCD080FD43BB08B8D 8829D9A3C514C44552BC9F71B7C70BE3 23489562 Recovery 2 [R2] Houston Methodist Research Institute 9606 SRS11175102 GSM5706925 MIA PaCa-2 pancreatic ductal adenocarcinoma cells pancreatic ductal adenocarcinoma cells Gemcitabine (100 nM) plus Torin 1 (100 nM) 9 days followed by culture in drug-free normal media for 12 days MIA.PaCa.2.Gemcitabine..100.nM..plus.Torin.1..100.nM..9.day.plus.drug.free.normal.12.days SAMN23489563 SRR17063415 2022-08-24T19:25:32Z 2021-11-29T11:00:53Z 42188437 12656531100 42188437 300 3967 https://sra-downloadb.be-md.ncbi.nlm.nih.gov/sos2/sra-pub-zq-20/SRR017/17063/SRR17063415/SRR17063415.lite.1 SRX13252253 RNA-Seq cDNA TRANSCRIPTOMIC PAIRED 0 0 ILLUMINA Illumina NovaSeq 6000 SRP348371 PRJNA784440 3 784440 SRS11175105 simple 9606 Homo sapiens GSM5706926 no GEO SRA1335844 public 2E57D49A7E831A6194D15AF8401F94E6 B6ABB60A6492F779FBD6C3589447F180 23489563 Recovery 3 [R3] Houston Methodist Research Institute 9606 SRS11175105 GSM5706926 MIA PaCa-2 pancreatic ductal adenocarcinoma cells pancreatic ductal adenocarcinoma cells Gemcitabine (100 nM) plus Torin 1 (100 nM) 9 days followed by culture in drug-free normal media for 12 days MIA.PaCa.2.Gemcitabine..100.nM..plus.Torin.1..100.nM..9.day.plus.drug.free.normal.12.days